Interpretation of proteomics identification results
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Nov 26, 2025 - Java
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protein-identification
Here are 9 public repositories matching this topic...
Highly adaptable common interface for proteomics search and de novo engines
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Aug 15, 2025 - Java
A Comet-based, best practices proteomics pipeline.
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Mar 21, 2024 - Python
MetaProteomeAnalyzer (MPA) software for analyzing and visualizing MS-based metaproteomics data.
bioinformatics-pipeline software proteomics metaproteomics protein-identification database-searchtool
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Aug 25, 2020 - TSQL
Wrapping script automating execution of Proteomic search engines, such as MSFragger.
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Sep 20, 2017 - Python
Portable Proteomics Pipeline
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Mar 20, 2017 - R
This project builds machine learning models to automatically detect and classify protein complexes in cryo-electron tomography (cryoET) images, enabling scalable analysis of cellular structures and supporting advanced biological and medical research.
bioinformatics deep-learning image-processing pytorch medical-imaging scientific-computing yolo protein-identification 3d-object-detection cryoet biomedical-ai 3d-image-analysis cryo-electron-tomography 3d-yolo
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Nov 24, 2025 - Jupyter Notebook
hmm hidden-markov-model hmmer protein-identification hmmer3 protein-sequencing nanopore-protein-sequencing
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Sep 29, 2024 - Jupyter Notebook
A pipeline to detect domains in cryo-EM density map by parsing domains from AlphaFold databases and fitting into the map for the best hits.
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Jan 6, 2026 - Python
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