amdirt v1.7.0

New features:

• download the dates table via amdirt download
• obtain dates for a subset of samples via amdirt convert
• add option to use a local AMDir installation to look up schemas instead of the slower look up from the GitHub servers and avoid IP blocking
• add option to download the table from ENA that is used for amdirt autofill when autofilling the library information

Bugfixes:

• actually use of the parameter --output in amdirt download
• infer required BibTex entries based on the library instead of the sample table
• pin version of Python module streamlit-aggrid to allow filtering on text columns
• improved parsing of the error messages
• fix choosing the colour chemistry of unknown sequencers when exporting nf-core/eager tables

Full Changelog: 1.6.5...1.7.0

amdirt v1.6.5

Patch release to take into account change of capitalization

Full Changelog: 1.6.4...1.6.5

amdirt v1.6.4

Changelog

Renaming AMDirT to amdirt (all lowercase)

Full Changelog: 1.6.2...1.6.4

AMDirT v.1.6.2

AMDirt v1.6.2

Patch release for 1.6.1

What's Changed

• Fix tag parsing when version is latest by @maxibor in #156

Full Changelog: 1.6.1...1.6.2

AMDirT v.1.6.1

Minor patch release to pin dependancies.

What's Changed

• Patch 1.6.1 by @maxibor in #154

Full Changelog: 1.6.0...1.6.1

AMDirT v.1.6.0

What's Changed

Documentation

• New docs to further address reviews comments by @jfy133 in #145
• Move hardware requirments to make install page by @jfy133 in #148

New features

• New download subcommand by @maxibor in #149

Full Changelog: 1.5.0...1.6.0

AMDirT v.1.5.0

Changelog

• Adding library filtering feature in convert and viewer
• Documentation update
• Various small bug fixes

AMDirT v1.4.6

Improve logging in markdown mode

AMDirT v1.4.5

Fix: enforce basic logging level

AMDirT v1.4.4

Refactor markdown output of the validate subcommand