Skip to content

map2slim memory requirements #263

@emrobe

Description

@emrobe

Hi,
I'm trying to use the --map2slim functionality to map a gaf-file to metagenomics slim. It' s 90+ GB in size. The process owltools starts swapping and dies at 0,5 TB (Yes, Terabyte) memory usage. Any way around this (except splitting my file into X pieces after prototyping size vs. memory usage)?

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions