Skip to content

numpy ValueError from lbfgs._lowlevel #212

@jihyunbak

Description

@jihyunbak

I get this error when trying to import pyuoi (installed through pip, v1.1.1) from python 3.8 (3.8.12) and numpy 1.21.2:

>>> from pyuoi.linear_model import UoI_Lasso
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/home/jhbak/opt/anaconda3/envs/cotula/lib/python3.8/site-packages/pyuoi/__init__.py", line 1, in <module>
    from .linear_model import UoI_Lasso
  File "/home/jhbak/opt/anaconda3/envs/cotula/lib/python3.8/site-packages/pyuoi/linear_model/__init__.py", line 10, in <module>
    from .logistic import MaskedCoefLogisticRegression, UoI_L1Logistic
  File "/home/jhbak/opt/anaconda3/envs/cotula/lib/python3.8/site-packages/pyuoi/linear_model/logistic.py", line 21, in <module>
    from ..lbfgs import fmin_lbfgs, AllZeroLBFGSError
  File "/home/jhbak/opt/anaconda3/envs/cotula/lib/python3.8/site-packages/pyuoi/lbfgs/__init__.py", line 8, in <module>
    from ._lowlevel import LBFGS, AllZeroLBFGSError  # noqa: F401
  File "pyuoi/lbfgs/_lowlevel.pyx", line 1, in init pyuoi.lbfgs._lowlevel
ValueError: numpy.ndarray size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject

I got the same (I think..) error when I tried combinations of these different versions in python 3.8:

  • numpy 1.20.3
  • pyuoi editable install using the latest commit (as of Aug 9)

The solution that finally worked for me was:

  • python 3.7 (3.7.13) --- looks like this was the key
  • numpy 1.20.3
  • pyuoi install from the latest commit.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions